Whole Exome sequencing - SRA

SRX194623: Whole Exome sequencing
4 ILLUMINA (Illumina HiSeq 2000) runs: 9.5M spots, 1.4G bases, 678.9Mb downloads

UUID: da3ce0de-e412-43dd-bbdb-57bc1e69202d

Design: Whole Exome sequencing via in-solution hybrid selection

Submitted by: Broad Institute (BI)

Study: Exome sequencing of (LWK) Luhya in Webuye, Kenya HapMap population

Sample: Coriell GM19023

Library:

Name: Catch-169981

Instrument: Illumina HiSeq 2000

Strategy: WXS

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Spot descriptor:

1 forward77 reverse

lsid: broadinstitute.org:bsp.prod.sample:3DATP

project: C470

sample_barcode: 219621.0

target_set: whole_exome_agilent_1.1_refseq_plus_3_boosters

work_request: 31672

Name	Step	Program	Version	Notes
base caller	2012-08-25 04:02:08.0	GAPipeline	RTA1.13.48	Sequencer Application 1.5.15.1

Runs: 4 runs, 9.5M spots, 1.4G bases, 678.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR588393	2,368,384	360M	173.4Mb	2012-10-13
SRR588496	2,383,632	362.3M	171.3Mb	2012-10-13
SRR588510	2,392,870	363.7M	169.2Mb	2012-10-13
SRR588544	2,313,419	351.6M	164.9Mb	2012-10-13

Supplemental Content

Alticola semicanus isolate Asem2474 breast cancer protein 1 (BRCA1) gene, partia...
Alticola semicanus isolate Asem2474 breast cancer protein 1 (BRCA1) gene, partial cds
gi|603066472|gb|KC962244.1|

Nucleotide
chaperone protein FimB/FhaD [Bordetella pertussis]
chaperone protein FimB/FhaD [Bordetella pertussis]
gi|1934827948|emb|SQE10096.1|

Protein
recombination activating protein 1, partial [Graptemys caglei]
recombination activating protein 1, partial [Graptemys caglei]
gi|1959483212|gb|QQX08259.1|

Protein
Aegilops tauschii subsp. strangulata isolate t-6s-30 DG glutamic oxaloacetic tra...
Aegilops tauschii subsp. strangulata isolate t-6s-30 DG glutamic oxaloacetic transaminase 2 (Got2) gene, partial cds
gi|2727447142|gb|OQ076813.1|

Nucleotide
neuron navigator 2 isoform X17 [Homo sapiens]
neuron navigator 2 isoform X17 [Homo sapiens]
gi|1370460574|ref|XP_024304526.1|

Protein

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SRA